Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CENPFP49454 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.79■□□□□ 0.6
CENPFP49454 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.79■□□□□ 0.6
CENPFP49454 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 PDIA3P1-201ENST00000471856 1510 ntBASIC18.79■□□□□ 0.6
CENPFP49454 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 AC010319.3-201ENST00000597028 470 ntBASIC18.79■□□□□ 0.6
CENPFP49454 AC007431.3-201ENST00000623221 587 ntBASIC18.79■□□□□ 0.6
CENPFP49454 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.79■□□□□ 0.6
CENPFP49454 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 AC138028.4-201ENST00000564984 1845 ntBASIC18.79■□□□□ 0.6
CENPFP49454 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CENPFP49454 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.79■□□□□ 0.6
CENPFP49454 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CENPFP49454 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.78■□□□□ 0.6
CENPFP49454 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.78■□□□□ 0.6
CENPFP49454 TMEM261P1-201ENST00000604899 340 ntBASIC18.78■□□□□ 0.6
CENPFP49454 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPFP49454 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CENPFP49454 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPFP49454 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.78■□□□□ 0.6
CENPFP49454 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CENPFP49454 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.78■□□□□ 0.6
CENPFP49454 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CENPFP49454 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.78■□□□□ 0.6
CENPFP49454 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.77■□□□□ 0.6
CENPFP49454 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.77■□□□□ 0.6
CENPFP49454 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CENPFP49454 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.77■□□□□ 0.6
CENPFP49454 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CENPFP49454 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CENPFP49454 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CENPFP49454 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CENPFP49454 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
CENPFP49454 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.77■□□□□ 0.59
CENPFP49454 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CENPFP49454 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.77■□□□□ 0.59
CENPFP49454 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPFP49454 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPFP49454 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.76■□□□□ 0.59
CENPFP49454 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.76■□□□□ 0.59
CENPFP49454 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.76■□□□□ 0.59
CENPFP49454 RN7SL190P-201ENST00000582519 257 ntBASIC18.76■□□□□ 0.59
CENPFP49454 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CENPFP49454 CETN4P-206ENST00000642099 2168 ntBASIC18.76■□□□□ 0.59
CENPFP49454 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.76■□□□□ 0.59
CENPFP49454 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPFP49454 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CENPFP49454 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.76■□□□□ 0.59
CENPFP49454 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.76■□□□□ 0.59
CENPFP49454 AC105021.1-202ENST00000570572 669 ntBASIC18.76■□□□□ 0.59
CENPFP49454 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.76■□□□□ 0.59
CENPFP49454 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPFP49454 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.76■□□□□ 0.59
CENPFP49454 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CENPFP49454 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CENPFP49454 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms