Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RFC3P40938 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RFC3P40938 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.48■□□□□ 0.07
RFC3P40938 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.48■□□□□ 0.07
RFC3P40938 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.48■□□□□ 0.07
RFC3P40938 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.48■□□□□ 0.07
RFC3P40938 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 AC027796.2-201ENST00000575326 344 ntBASIC15.48■□□□□ 0.07
RFC3P40938 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RFC3P40938 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RFC3P40938 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RFC3P40938 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.48■□□□□ 0.07
RFC3P40938 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RFC3P40938 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
RFC3P40938 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.47■□□□□ 0.07
RFC3P40938 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 AC129492.6-201ENST00000611383 1305 ntBASIC15.47■□□□□ 0.07
RFC3P40938 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RFC3P40938 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.47■□□□□ 0.07
RFC3P40938 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.47■□□□□ 0.07
RFC3P40938 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RFC3P40938 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.47■□□□□ 0.07
RFC3P40938 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RFC3P40938 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.47■□□□□ 0.07
RFC3P40938 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.47■□□□□ 0.07
RFC3P40938 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.47■□□□□ 0.07
RFC3P40938 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.47■□□□□ 0.07
RFC3P40938 AC092902.6-201ENST00000641783 218 ntBASIC15.47■□□□□ 0.07
RFC3P40938 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.47■□□□□ 0.07
RFC3P40938 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.47■□□□□ 0.07
RFC3P40938 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RFC3P40938 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RFC3P40938 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RFC3P40938 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RFC3P40938 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC3P40938 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.46■□□□□ 0.07
RFC3P40938 AC093525.9-201ENST00000624961 1746 ntBASIC15.46■□□□□ 0.07
RFC3P40938 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC3P40938 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.46■□□□□ 0.07
RFC3P40938 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RFC3P40938 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms