Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFC1P35251 PCDHA14-201ENST00000506751 2298 ntBASIC17.83■□□□□ 0.45
RFC1P35251 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RFC1P35251 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFC1P35251 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
RFC1P35251 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFC1P35251 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
RFC1P35251 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RFC1P35251 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFC1P35251 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFC1P35251 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.83■□□□□ 0.44
RFC1P35251 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.83■□□□□ 0.44
RFC1P35251 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.83■□□□□ 0.44
RFC1P35251 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.83■□□□□ 0.44
RFC1P35251 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 AL805961.1-202ENST00000641562 540 ntBASIC17.83■□□□□ 0.44
RFC1P35251 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RFC1P35251 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC1P35251 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC1P35251 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RFC1P35251 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RFC1P35251 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 AC087163.2-201ENST00000457299 853 ntBASIC17.82■□□□□ 0.44
RFC1P35251 RPS15P9-201ENST00000494093 319 ntBASIC17.82■□□□□ 0.44
RFC1P35251 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.82■□□□□ 0.44
RFC1P35251 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RFC1P35251 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFC1P35251 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC1P35251 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.82■□□□□ 0.44
RFC1P35251 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFC1P35251 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC1P35251 KRT8P49-201ENST00000604166 1432 ntBASIC17.81■□□□□ 0.44
RFC1P35251 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC1P35251 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RFC1P35251 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.81■□□□□ 0.44
RFC1P35251 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 AC136632.2-201ENST00000512891 861 ntBASIC17.81■□□□□ 0.44
RFC1P35251 AP002469.2-201ENST00000531724 424 ntBASIC17.81■□□□□ 0.44
RFC1P35251 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC1P35251 AL160237.2-201ENST00000556165 472 ntBASIC17.81■□□□□ 0.44
RFC1P35251 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.81■□□□□ 0.44
RFC1P35251 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.81■□□□□ 0.44
RFC1P35251 AF228730.7-201ENST00000641842 219 ntBASIC17.81■□□□□ 0.44
RFC1P35251 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFC1P35251 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RFC1P35251 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC1P35251 AP002414.3-201ENST00000589352 1468 ntBASIC17.81■□□□□ 0.44
RFC1P35251 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC1P35251 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFC1P35251 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.8■□□□□ 0.44
RFC1P35251 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms