Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HOXC8P31273 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HOXC8P31273 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC8P31273 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC8P31273 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC8P31273 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 AL080243.2-201ENST00000418783 582 ntBASIC18.22■□□□□ 0.51
HOXC8P31273 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.22■□□□□ 0.51
HOXC8P31273 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC8P31273 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.22■□□□□ 0.51
HOXC8P31273 ZNF890P-202ENST00000530367 1156 ntBASIC18.22■□□□□ 0.51
HOXC8P31273 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
HOXC8P31273 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC8P31273 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.22■□□□□ 0.51
HOXC8P31273 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HOXC8P31273 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HOXC8P31273 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HOXC8P31273 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.21■□□□□ 0.51
HOXC8P31273 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.21■□□□□ 0.51
HOXC8P31273 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.21■□□□□ 0.51
HOXC8P31273 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HOXC8P31273 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HOXC8P31273 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.21■□□□□ 0.51
HOXC8P31273 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.21■□□□□ 0.51
HOXC8P31273 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 AC093724.1-201ENST00000448659 1027 ntBASIC18.21■□□□□ 0.51
HOXC8P31273 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HOXC8P31273 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.21■□□□□ 0.51
HOXC8P31273 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.21■□□□□ 0.51
HOXC8P31273 AC008738.7-201ENST00000609744 511 ntBASIC18.21■□□□□ 0.51
HOXC8P31273 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.21■□□□□ 0.51
HOXC8P31273 AL662799.1-202ENST00000614205 422 ntBASIC18.21■□□□□ 0.51
HOXC8P31273 AC025048.6-201ENST00000634326 1161 ntBASIC18.21■□□□□ 0.51
HOXC8P31273 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HOXC8P31273 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
HOXC8P31273 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HOXC8P31273 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
HOXC8P31273 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
HOXC8P31273 AL512652.2-201ENST00000625156 1716 ntBASIC18.2■□□□□ 0.5
HOXC8P31273 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 CETN4P-206ENST00000642099 2168 ntBASIC18.2■□□□□ 0.5
HOXC8P31273 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HOXC8P31273 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.2■□□□□ 0.5
HOXC8P31273 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC8P31273 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC8P31273 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXC8P31273 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC8P31273 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC8P31273 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC8P31273 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms