Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.32□□□□□ -0.12
VAMP1P23763 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.32□□□□□ -0.12
VAMP1P23763 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.32□□□□□ -0.12
VAMP1P23763 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.32□□□□□ -0.12
VAMP1P23763 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 AC145098.2-201ENST00000623593 3026 ntBASIC14.32□□□□□ -0.12
VAMP1P23763 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 MYO15B-237ENST00000642007 4893 ntBASIC14.32□□□□□ -0.12
VAMP1P23763 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.32□□□□□ -0.12
VAMP1P23763 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.32□□□□□ -0.12
VAMP1P23763 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
VAMP1P23763 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAMP1P23763 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VAMP1P23763 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.31□□□□□ -0.12
VAMP1P23763 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 AP002490.2-201ENST00000524791 560 ntBASIC14.31□□□□□ -0.12
VAMP1P23763 KRT18P6-201ENST00000555540 1265 ntBASIC14.31□□□□□ -0.12
VAMP1P23763 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VAMP1P23763 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAMP1P23763 KRT89P-201ENST00000620027 1478 ntBASIC14.31□□□□□ -0.12
VAMP1P23763 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.31□□□□□ -0.12
VAMP1P23763 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
VAMP1P23763 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.3□□□□□ -0.12
VAMP1P23763 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.3□□□□□ -0.12
VAMP1P23763 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.3□□□□□ -0.12
VAMP1P23763 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 IGHV3-52-201ENST00000519770 353 ntBASIC14.3□□□□□ -0.12
VAMP1P23763 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.3□□□□□ -0.12
VAMP1P23763 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.3□□□□□ -0.12
VAMP1P23763 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
VAMP1P23763 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms