Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 AC092171.3-201ENST00000610122 2651 ntBASIC17.38■□□□□ 0.37
ERCC2P18074 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ERCC2P18074 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC2P18074 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC2P18074 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.38■□□□□ 0.37
ERCC2P18074 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ERCC2P18074 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC2P18074 PMS2P1-201ENST00000431037 1228 ntBASIC17.38■□□□□ 0.37
ERCC2P18074 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC2P18074 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.38■□□□□ 0.37
ERCC2P18074 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.38■□□□□ 0.37
ERCC2P18074 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 MIR4492-201ENST00000581627 80 ntBASIC17.38■□□□□ 0.37
ERCC2P18074 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 Z83851.2-201ENST00000609564 659 ntBASIC17.38■□□□□ 0.37
ERCC2P18074 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC2P18074 SLC22A20-204ENST00000530038 1673 ntBASIC17.38■□□□□ 0.37
ERCC2P18074 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 AC099398.1-201ENST00000567919 2776 ntBASIC17.38■□□□□ 0.37
ERCC2P18074 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC2P18074 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ERCC2P18074 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC2P18074 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 AL590627.1-203ENST00000421194 1026 ntBASIC17.37■□□□□ 0.37
ERCC2P18074 VN2R19P-201ENST00000442399 1052 ntBASIC17.37■□□□□ 0.37
ERCC2P18074 AC145285.3-201ENST00000564603 959 ntBASIC17.37■□□□□ 0.37
ERCC2P18074 AC091167.2-201ENST00000579581 588 ntBASIC17.37■□□□□ 0.37
ERCC2P18074 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC2P18074 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC2P18074 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.37■□□□□ 0.37
ERCC2P18074 AC131009.4-201ENST00000624048 1740 ntBASIC17.37■□□□□ 0.37
ERCC2P18074 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ERCC2P18074 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC2P18074 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 AC104109.2-201ENST00000602919 1418 ntBASIC17.37■□□□□ 0.37
ERCC2P18074 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC2P18074 AL353732.1-201ENST00000569618 1459 ntBASIC17.37■□□□□ 0.37
ERCC2P18074 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
ERCC2P18074 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ERCC2P18074 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC2P18074 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ERCC2P18074 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ERCC2P18074 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 CRYGEP-201ENST00000412192 528 ntBASIC17.36■□□□□ 0.37
ERCC2P18074 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.36■□□□□ 0.37
ERCC2P18074 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 FAM185BP-201ENST00000443595 716 ntBASIC17.36■□□□□ 0.37
ERCC2P18074 RPL13AP23-201ENST00000480739 586 ntBASIC17.36■□□□□ 0.37
ERCC2P18074 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC2P18074 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.36■□□□□ 0.37
ERCC2P18074 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ERCC2P18074 AC034105.1-201ENST00000563488 319 ntBASIC17.36■□□□□ 0.37
ERCC2P18074 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC2P18074 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ERCC2P18074 UBALD1-205ENST00000590891 2641 ntBASIC17.36■□□□□ 0.37
ERCC2P18074 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.36■□□□□ 0.37
ERCC2P18074 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms