Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 HLA-H-201ENST00000383620 1096 ntBASIC18.64■□□□□ 0.57
SMPD1P17405 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SMPD1P17405 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.64■□□□□ 0.57
SMPD1P17405 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.64■□□□□ 0.57
SMPD1P17405 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.64■□□□□ 0.57
SMPD1P17405 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.64■□□□□ 0.57
SMPD1P17405 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 HLA-V-204ENST00000476601 1289 ntBASIC18.64■□□□□ 0.57
SMPD1P17405 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.64■□□□□ 0.57
SMPD1P17405 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.64■□□□□ 0.57
SMPD1P17405 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.64■□□□□ 0.57
SMPD1P17405 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.64■□□□□ 0.57
SMPD1P17405 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.64■□□□□ 0.57
SMPD1P17405 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.64■□□□□ 0.57
SMPD1P17405 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SMPD1P17405 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SMPD1P17405 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD1P17405 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMPD1P17405 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.63■□□□□ 0.57
SMPD1P17405 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.63■□□□□ 0.57
SMPD1P17405 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SMPD1P17405 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SMPD1P17405 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
SMPD1P17405 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.63■□□□□ 0.57
SMPD1P17405 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.63■□□□□ 0.57
SMPD1P17405 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.63■□□□□ 0.57
SMPD1P17405 AC009118.2-201ENST00000613275 655 ntBASIC18.63■□□□□ 0.57
SMPD1P17405 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 TUBB8P12-201ENST00000308911 1335 ntBASIC18.63■□□□□ 0.57
SMPD1P17405 TUBB7P-202ENST00000428444 1305 ntBASIC18.63■□□□□ 0.57
SMPD1P17405 TUBB8P7-204ENST00000567960 1332 ntBASIC18.63■□□□□ 0.57
SMPD1P17405 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD1P17405 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMPD1P17405 AC006277.1-201ENST00000624348 1610 ntBASIC18.63■□□□□ 0.57
SMPD1P17405 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.62■□□□□ 0.57
SMPD1P17405 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.62■□□□□ 0.57
SMPD1P17405 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD1P17405 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SMPD1P17405 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 PIN1P1-201ENST00000412108 996 ntBASIC18.62■□□□□ 0.57
SMPD1P17405 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.62■□□□□ 0.57
SMPD1P17405 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.62■□□□□ 0.57
SMPD1P17405 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.62■□□□□ 0.57
SMPD1P17405 SPDYE22P-201ENST00000582158 798 ntBASIC18.62■□□□□ 0.57
SMPD1P17405 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.62■□□□□ 0.57
SMPD1P17405 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD1P17405 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
SMPD1P17405 AL662799.1-202ENST00000614205 422 ntBASIC18.62■□□□□ 0.57
SMPD1P17405 SPTSSB-204ENST00000617024 1292 ntBASIC18.62■□□□□ 0.57
SMPD1P17405 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD1P17405 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD1P17405 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD1P17405 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD1P17405 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.62■□□□□ 0.57
SMPD1P17405 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD1P17405 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.61■□□□□ 0.57
SMPD1P17405 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.61■□□□□ 0.57
SMPD1P17405 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SMPD1P17405 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMPD1P17405 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.61■□□□□ 0.57
SMPD1P17405 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.61■□□□□ 0.57
SMPD1P17405 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMPD1P17405 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.61■□□□□ 0.57
SMPD1P17405 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.61■□□□□ 0.57
SMPD1P17405 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.61■□□□□ 0.57
SMPD1P17405 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.61■□□□□ 0.57
SMPD1P17405 AC013467.2-201ENST00000605472 835 ntBASIC18.61■□□□□ 0.57
SMPD1P17405 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms