Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 KRT18P57-201ENST00000443599 1254 ntBASIC14.37□□□□□ -0.11
HIST1H1DP16402 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1DP16402 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1DP16402 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 SIGLEC30P-201ENST00000455569 941 ntBASIC14.36□□□□□ -0.11
HIST1H1DP16402 AL671277.2-201ENST00000458060 996 ntBASIC14.36□□□□□ -0.11
HIST1H1DP16402 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 AC093827.2-201ENST00000512654 315 ntBASIC14.36□□□□□ -0.11
HIST1H1DP16402 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 AC011498.5-201ENST00000592027 486 ntBASIC14.36□□□□□ -0.11
HIST1H1DP16402 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 AC005052.1-201ENST00000625181 2492 ntBASIC14.36□□□□□ -0.11
HIST1H1DP16402 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1DP16402 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1DP16402 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H1DP16402 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H1DP16402 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms