Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1A3P13637 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1A3P13637 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1A3P13637 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP1A3P13637 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1A3P13637 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
ATP1A3P13637 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP1A3P13637 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1A3P13637 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1A3P13637 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP1A3P13637 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP1A3P13637 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ATP1A3P13637 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATP1A3P13637 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP1A3P13637 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP1A3P13637 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP1A3P13637 IGHV3-47-201ENST00000425060 335 ntBASIC18.66■□□□□ 0.58
ATP1A3P13637 DRAXINP1-201ENST00000437611 948 ntBASIC18.66■□□□□ 0.58
ATP1A3P13637 KRT17P6-201ENST00000453795 1220 ntBASIC18.66■□□□□ 0.58
ATP1A3P13637 MINOS1P3-201ENST00000457048 203 ntBASIC18.66■□□□□ 0.58
ATP1A3P13637 TOB2P1-201ENST00000469761 992 ntBASIC18.66■□□□□ 0.58
ATP1A3P13637 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP1A3P13637 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP1A3P13637 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ATP1A3P13637 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
ATP1A3P13637 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP1A3P13637 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP1A3P13637 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP1A3P13637 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP1A3P13637 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP1A3P13637 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
ATP1A3P13637 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP1A3P13637 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP1A3P13637 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP1A3P13637 FAM86EP-206ENST00000510506 987 ntBASIC18.65■□□□□ 0.58
ATP1A3P13637 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP1A3P13637 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP1A3P13637 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP1A3P13637 AL121956.5-201ENST00000625261 221 ntBASIC18.65■□□□□ 0.58
ATP1A3P13637 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATP1A3P13637 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP1A3P13637 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 AL021920.2-201ENST00000624828 1351 ntBASIC18.65■□□□□ 0.58
ATP1A3P13637 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP1A3P13637 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP1A3P13637 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP1A3P13637 KRT8P49-201ENST00000604166 1432 ntBASIC18.65■□□□□ 0.58
ATP1A3P13637 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP1A3P13637 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ATP1A3P13637 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP1A3P13637 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.64■□□□□ 0.58
ATP1A3P13637 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.64■□□□□ 0.58
ATP1A3P13637 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.64■□□□□ 0.58
ATP1A3P13637 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ATP1A3P13637 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP1A3P13637 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP1A3P13637 AC006277.1-201ENST00000624348 1610 ntBASIC18.64■□□□□ 0.57
ATP1A3P13637 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATP1A3P13637 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 TSSC2-201ENST00000450217 709 ntBASIC18.64■□□□□ 0.57
ATP1A3P13637 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP1A3P13637 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP1A3P13637 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP1A3P13637 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms