Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCG2P13521 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.4■□□□□ 0.7
SCG2P13521 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.4■□□□□ 0.7
SCG2P13521 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.4■□□□□ 0.7
SCG2P13521 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SCG2P13521 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.4■□□□□ 0.7
SCG2P13521 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.4■□□□□ 0.7
SCG2P13521 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCG2P13521 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.4■□□□□ 0.7
SCG2P13521 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SCG2P13521 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.4■□□□□ 0.7
SCG2P13521 AC007064.4-201ENST00000637740 555 ntBASIC19.4■□□□□ 0.7
SCG2P13521 AL645728.2-201ENST00000641974 660 ntBASIC19.4■□□□□ 0.7
SCG2P13521 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.4■□□□□ 0.7
SCG2P13521 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.4■□□□□ 0.7
SCG2P13521 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.4■□□□□ 0.7
SCG2P13521 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCG2P13521 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.39■□□□□ 0.7
SCG2P13521 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
SCG2P13521 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCG2P13521 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SCG2P13521 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCG2P13521 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SCG2P13521 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SCG2P13521 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.39■□□□□ 0.69
SCG2P13521 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.39■□□□□ 0.69
SCG2P13521 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SCG2P13521 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.39■□□□□ 0.69
SCG2P13521 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SCG2P13521 KRT19P2-202ENST00000557173 1012 ntBASIC19.39■□□□□ 0.69
SCG2P13521 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.39■□□□□ 0.69
SCG2P13521 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.39■□□□□ 0.69
SCG2P13521 AP001350.2-201ENST00000625104 1094 ntBASIC19.39■□□□□ 0.69
SCG2P13521 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.39■□□□□ 0.69
SCG2P13521 AL139011.1-202ENST00000642063 584 ntBASIC19.39■□□□□ 0.69
SCG2P13521 BCAR1-209ENST00000546196 1340 ntBASIC19.39■□□□□ 0.69
SCG2P13521 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SCG2P13521 AC025580.3-201ENST00000617932 1424 ntBASIC19.39■□□□□ 0.69
SCG2P13521 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SCG2P13521 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SCG2P13521 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.39■□□□□ 0.69
SCG2P13521 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.39■□□□□ 0.69
SCG2P13521 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 HMGA1P7-201ENST00000406908 502 ntBASIC19.38■□□□□ 0.69
SCG2P13521 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SCG2P13521 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.38■□□□□ 0.69
SCG2P13521 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCG2P13521 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.38■□□□□ 0.69
SCG2P13521 PGAM5P1-201ENST00000518923 814 ntBASIC19.38■□□□□ 0.69
SCG2P13521 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.38■□□□□ 0.69
SCG2P13521 AL031432.2-201ENST00000566714 459 ntBASIC19.38■□□□□ 0.69
SCG2P13521 AL928711.1-201ENST00000570165 459 ntBASIC19.38■□□□□ 0.69
SCG2P13521 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms