Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH1P12830 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDH1P12830 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH1P12830 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH1P12830 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 MRPL3P1-201ENST00000400109 1033 ntBASIC16.51■□□□□ 0.23
CDH1P12830 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH1P12830 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH1P12830 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH1P12830 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH1P12830 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
CDH1P12830 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH1P12830 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH1P12830 AL773604.1-201ENST00000617417 272 ntBASIC16.51■□□□□ 0.23
CDH1P12830 AC008735.5-201ENST00000623544 497 ntBASIC16.51■□□□□ 0.23
CDH1P12830 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CDH1P12830 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH1P12830 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH1P12830 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH1P12830 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH1P12830 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH1P12830 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH1P12830 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH1P12830 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH1P12830 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH1P12830 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 AC009078.2-202ENST00000463353 338 ntBASIC16.5■□□□□ 0.23
CDH1P12830 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH1P12830 AC124947.2-201ENST00000547118 1133 ntBASIC16.5■□□□□ 0.23
CDH1P12830 AC012640.2-201ENST00000561606 901 ntBASIC16.5■□□□□ 0.23
CDH1P12830 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH1P12830 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH1P12830 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CDH1P12830 FAM215A-202ENST00000632077 792 ntBASIC16.5■□□□□ 0.23
CDH1P12830 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH1P12830 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH1P12830 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
CDH1P12830 AC243591.1-201ENST00000452967 1364 ntBASIC16.5■□□□□ 0.23
CDH1P12830 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH1P12830 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH1P12830 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH1P12830 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH1P12830 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CDH1P12830 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDH1P12830 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH1P12830 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH1P12830 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH1P12830 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH1P12830 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 PTCHD3P3-201ENST00000403073 906 ntBASIC16.49■□□□□ 0.23
CDH1P12830 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH1P12830 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH1P12830 KRT18P27-201ENST00000427733 1299 ntBASIC16.49■□□□□ 0.23
CDH1P12830 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH1P12830 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH1P12830 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH1P12830 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH1P12830 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.49■□□□□ 0.23
CDH1P12830 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH1P12830 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.49■□□□□ 0.23
CDH1P12830 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH1P12830 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
CDH1P12830 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDH1P12830 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH1P12830 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms