Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.69■□□□□ 0.1
UBL4AP11441 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBL4AP11441 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.68■□□□□ 0.1
UBL4AP11441 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 AC004870.1-201ENST00000315132 882 ntBASIC15.68■□□□□ 0.1
UBL4AP11441 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 LAGE3P1-201ENST00000425356 484 ntBASIC15.68■□□□□ 0.1
UBL4AP11441 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.68■□□□□ 0.1
UBL4AP11441 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.68■□□□□ 0.1
UBL4AP11441 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.68■□□□□ 0.1
UBL4AP11441 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 AL121912.1-201ENST00000603683 238 ntBASIC15.68■□□□□ 0.1
UBL4AP11441 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.68■□□□□ 0.1
UBL4AP11441 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.68■□□□□ 0.1
UBL4AP11441 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
UBL4AP11441 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
UBL4AP11441 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.68■□□□□ 0.1
UBL4AP11441 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UBL4AP11441 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBL4AP11441 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBL4AP11441 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBL4AP11441 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.67■□□□□ 0.1
UBL4AP11441 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBL4AP11441 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.67■□□□□ 0.1
UBL4AP11441 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.67■□□□□ 0.1
UBL4AP11441 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.67■□□□□ 0.1
UBL4AP11441 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.67■□□□□ 0.1
UBL4AP11441 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 AC006557.2-201ENST00000592985 1240 ntBASIC15.67■□□□□ 0.1
UBL4AP11441 AC004706.3-202ENST00000621574 984 ntBASIC15.67■□□□□ 0.1
UBL4AP11441 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
UBL4AP11441 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBL4AP11441 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
UBL4AP11441 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBL4AP11441 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
UBL4AP11441 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.67■□□□□ 0.1
UBL4AP11441 AC005915.1-201ENST00000624912 2018 ntBASIC15.67■□□□□ 0.1
UBL4AP11441 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 LINC02228-204ENST00000642115 2962 ntBASIC15.66■□□□□ 0.1
UBL4AP11441 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBL4AP11441 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.66■□□□□ 0.1
UBL4AP11441 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms