Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.76■□□□□ 0.43
RARAP10276 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.76■□□□□ 0.43
RARAP10276 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.76■□□□□ 0.43
RARAP10276 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RARAP10276 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
RARAP10276 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
RARAP10276 AC243591.1-201ENST00000452967 1364 ntBASIC17.76■□□□□ 0.43
RARAP10276 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 AC092364.2-201ENST00000596710 2692 ntBASIC17.75■□□□□ 0.43
RARAP10276 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.75■□□□□ 0.43
RARAP10276 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RARAP10276 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RARAP10276 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RARAP10276 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.75■□□□□ 0.43
RARAP10276 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.75■□□□□ 0.43
RARAP10276 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.75■□□□□ 0.43
RARAP10276 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RARAP10276 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.75■□□□□ 0.43
RARAP10276 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RARAP10276 AC139887.3-201ENST00000568585 713 ntBASIC17.75■□□□□ 0.43
RARAP10276 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.75■□□□□ 0.43
RARAP10276 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 CYP2T1P-202ENST00000641596 2535 ntBASIC17.75■□□□□ 0.43
RARAP10276 AC103702.1-201ENST00000548801 2630 ntBASIC17.75■□□□□ 0.43
RARAP10276 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RARAP10276 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RARAP10276 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RARAP10276 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RARAP10276 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RARAP10276 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.74■□□□□ 0.43
RARAP10276 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.74■□□□□ 0.43
RARAP10276 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.74■□□□□ 0.43
RARAP10276 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.74■□□□□ 0.43
RARAP10276 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.74■□□□□ 0.43
RARAP10276 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.74■□□□□ 0.43
RARAP10276 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.74■□□□□ 0.43
RARAP10276 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.74■□□□□ 0.43
RARAP10276 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.74■□□□□ 0.43
RARAP10276 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 TERC-201ENST00000602385 541 ntBASIC17.74■□□□□ 0.43
RARAP10276 AC004706.3-202ENST00000621574 984 ntBASIC17.74■□□□□ 0.43
RARAP10276 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
RARAP10276 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.74■□□□□ 0.43
RARAP10276 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RARAP10276 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 TUBB8P12-201ENST00000308911 1335 ntBASIC17.73■□□□□ 0.43
RARAP10276 TUBB7P-202ENST00000428444 1305 ntBASIC17.73■□□□□ 0.43
RARAP10276 TUBB8P7-204ENST00000567960 1332 ntBASIC17.73■□□□□ 0.43
RARAP10276 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 MST1L-201ENST00000442552 2185 ntBASIC17.73■□□□□ 0.43
RARAP10276 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.73■□□□□ 0.43
RARAP10276 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 DUSP5P1-201ENST00000441325 1139 ntBASIC17.73■□□□□ 0.43
RARAP10276 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.73■□□□□ 0.43
RARAP10276 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RARAP10276 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RARAP10276 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms