Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.08□□□□□ -0.16
CTSDP07339 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSDP07339 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CTSDP07339 AL021920.2-201ENST00000624828 1351 ntBASIC14.08□□□□□ -0.16
CTSDP07339 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.07□□□□□ -0.16
CTSDP07339 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CTSDP07339 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSDP07339 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 LIN28AP1-201ENST00000429574 405 ntBASIC14.07□□□□□ -0.16
CTSDP07339 SLC25A3P1-201ENST00000443844 931 ntBASIC14.07□□□□□ -0.16
CTSDP07339 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CTSDP07339 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 LINC01023-201ENST00000606054 436 ntBASIC14.07□□□□□ -0.16
CTSDP07339 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSDP07339 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTSDP07339 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 Z83836.1-201ENST00000624605 1642 ntBASIC14.07□□□□□ -0.16
CTSDP07339 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSDP07339 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSDP07339 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSDP07339 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSDP07339 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSDP07339 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CTSDP07339 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSDP07339 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSDP07339 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 AL596087.1-201ENST00000400979 1969 ntBASIC14.06□□□□□ -0.16
CTSDP07339 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSDP07339 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSDP07339 KLF4P1-201ENST00000412782 1185 ntBASIC14.06□□□□□ -0.16
CTSDP07339 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSDP07339 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSDP07339 ATP5G1P1-201ENST00000448724 379 ntBASIC14.06□□□□□ -0.16
CTSDP07339 GUSBP12-201ENST00000513727 720 ntBASIC14.06□□□□□ -0.16
CTSDP07339 DUX4L17-201ENST00000557360 1267 ntBASIC14.06□□□□□ -0.16
CTSDP07339 AC005363.2-201ENST00000618631 242 ntBASIC14.06□□□□□ -0.16
CTSDP07339 AC097493.4-201ENST00000641197 219 ntBASIC14.06□□□□□ -0.16
CTSDP07339 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSDP07339 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms