Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 GIMAP3P-201ENST00000495150 836 ntBASIC17.73■□□□□ 0.43
RB1P06400 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.73■□□□□ 0.43
RB1P06400 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.73■□□□□ 0.43
RB1P06400 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
RB1P06400 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.73■□□□□ 0.43
RB1P06400 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.73■□□□□ 0.43
RB1P06400 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.73■□□□□ 0.43
RB1P06400 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.73■□□□□ 0.43
RB1P06400 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.73■□□□□ 0.43
RB1P06400 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RB1P06400 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.73■□□□□ 0.43
RB1P06400 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.73■□□□□ 0.43
RB1P06400 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
RB1P06400 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.72■□□□□ 0.43
RB1P06400 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RB1P06400 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.72■□□□□ 0.43
RB1P06400 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.72■□□□□ 0.43
RB1P06400 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RB1P06400 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
RB1P06400 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RB1P06400 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.72■□□□□ 0.43
RB1P06400 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.72■□□□□ 0.43
RB1P06400 AC098859.1-201ENST00000502915 1238 ntBASIC17.72■□□□□ 0.43
RB1P06400 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.72■□□□□ 0.43
RB1P06400 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.72■□□□□ 0.43
RB1P06400 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.72■□□□□ 0.43
RB1P06400 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.72■□□□□ 0.43
RB1P06400 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
RB1P06400 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RB1P06400 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RB1P06400 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.72■□□□□ 0.43
RB1P06400 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.72■□□□□ 0.43
RB1P06400 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RB1P06400 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.71■□□□□ 0.43
RB1P06400 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RB1P06400 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.71■□□□□ 0.43
RB1P06400 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.71■□□□□ 0.43
RB1P06400 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RB1P06400 AP006294.1-201ENST00000415407 339 ntBASIC17.71■□□□□ 0.43
RB1P06400 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RB1P06400 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.71■□□□□ 0.43
RB1P06400 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.71■□□□□ 0.43
RB1P06400 AC105021.1-202ENST00000570572 669 ntBASIC17.71■□□□□ 0.43
RB1P06400 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RB1P06400 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.71■□□□□ 0.43
RB1P06400 AC004840.1-201ENST00000636359 365 ntBASIC17.71■□□□□ 0.43
RB1P06400 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.71■□□□□ 0.43
RB1P06400 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RB1P06400 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RB1P06400 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.71■□□□□ 0.42
RB1P06400 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RB1P06400 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.71■□□□□ 0.42
RB1P06400 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 AL355312.1-201ENST00000407115 2176 ntBASIC17.7■□□□□ 0.42
RB1P06400 AC093525.9-201ENST00000624961 1746 ntBASIC17.7■□□□□ 0.42
RB1P06400 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.7■□□□□ 0.42
RB1P06400 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RB1P06400 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.7■□□□□ 0.42
RB1P06400 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.7■□□□□ 0.42
RB1P06400 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.7■□□□□ 0.42
RB1P06400 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.7■□□□□ 0.42
RB1P06400 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.7■□□□□ 0.42
RB1P06400 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 AC011495.1-201ENST00000498085 584 ntBASIC17.7■□□□□ 0.42
RB1P06400 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RB1P06400 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.7■□□□□ 0.42
RB1P06400 AC135586.1-201ENST00000539323 574 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms