Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.84■□□□□ 0.13
OPN1SWP03999 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
OPN1SWP03999 DRAXINP1-201ENST00000437611 948 ntBASIC15.84■□□□□ 0.13
OPN1SWP03999 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 SIGLEC30P-201ENST00000455569 941 ntBASIC15.84■□□□□ 0.13
OPN1SWP03999 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.84■□□□□ 0.13
OPN1SWP03999 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.84■□□□□ 0.13
OPN1SWP03999 AC074051.2-201ENST00000565115 352 ntBASIC15.84■□□□□ 0.13
OPN1SWP03999 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.84■□□□□ 0.13
OPN1SWP03999 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.84■□□□□ 0.13
OPN1SWP03999 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 AC116407.4-201ENST00000623319 1061 ntBASIC15.84■□□□□ 0.13
OPN1SWP03999 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
OPN1SWP03999 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.84■□□□□ 0.13
OPN1SWP03999 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
OPN1SWP03999 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
OPN1SWP03999 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
OPN1SWP03999 AC097637.2-201ENST00000624096 1997 ntBASIC15.84■□□□□ 0.13
OPN1SWP03999 AC005052.1-201ENST00000625181 2492 ntBASIC15.84■□□□□ 0.13
OPN1SWP03999 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
OPN1SWP03999 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
OPN1SWP03999 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.84■□□□□ 0.13
OPN1SWP03999 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.84■□□□□ 0.13
OPN1SWP03999 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
OPN1SWP03999 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
OPN1SWP03999 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
OPN1SWP03999 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
OPN1SWP03999 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
OPN1SWP03999 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
OPN1SWP03999 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
OPN1SWP03999 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.83■□□□□ 0.12
OPN1SWP03999 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
OPN1SWP03999 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.83■□□□□ 0.12
OPN1SWP03999 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
OPN1SWP03999 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
OPN1SWP03999 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 PCED1CP-201ENST00000419887 785 ntBASIC15.83■□□□□ 0.12
OPN1SWP03999 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.83■□□□□ 0.12
OPN1SWP03999 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.83■□□□□ 0.12
OPN1SWP03999 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 AP002490.2-201ENST00000524791 560 ntBASIC15.83■□□□□ 0.12
OPN1SWP03999 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.83■□□□□ 0.12
OPN1SWP03999 AL049597.2-201ENST00000565575 961 ntBASIC15.83■□□□□ 0.12
OPN1SWP03999 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
OPN1SWP03999 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.83■□□□□ 0.12
OPN1SWP03999 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.83■□□□□ 0.12
OPN1SWP03999 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.83■□□□□ 0.12
OPN1SWP03999 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.83■□□□□ 0.12
OPN1SWP03999 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
OPN1SWP03999 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.83■□□□□ 0.12
OPN1SWP03999 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
OPN1SWP03999 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.82■□□□□ 0.12
OPN1SWP03999 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.82■□□□□ 0.12
OPN1SWP03999 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
OPN1SWP03999 SPDYE21P-201ENST00000413323 827 ntBASIC15.82■□□□□ 0.12
OPN1SWP03999 IGHV3-47-201ENST00000425060 335 ntBASIC15.82■□□□□ 0.12
OPN1SWP03999 ACTG1P4-201ENST00000425123 1122 ntBASIC15.82■□□□□ 0.12
OPN1SWP03999 DUX4L17-201ENST00000557360 1267 ntBASIC15.82■□□□□ 0.12
OPN1SWP03999 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
OPN1SWP03999 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.82■□□□□ 0.12
OPN1SWP03999 AC114341.1-201ENST00000618070 349 ntBASIC15.82■□□□□ 0.12
OPN1SWP03999 AP000867.4-201ENST00000641616 219 ntBASIC15.82■□□□□ 0.12
OPN1SWP03999 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.82■□□□□ 0.12
OPN1SWP03999 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
OPN1SWP03999 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
OPN1SWP03999 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms