Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.48■□□□□ 0.71
COL2A1P02458 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 GGT4P-201ENST00000623672 1708 ntBASIC19.48■□□□□ 0.71
COL2A1P02458 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.48■□□□□ 0.71
COL2A1P02458 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
COL2A1P02458 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
COL2A1P02458 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
COL2A1P02458 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
COL2A1P02458 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 SPTLC1P1-201ENST00000447199 261 ntBASIC19.48■□□□□ 0.71
COL2A1P02458 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.48■□□□□ 0.71
COL2A1P02458 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.48■□□□□ 0.71
COL2A1P02458 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.48■□□□□ 0.71
COL2A1P02458 AC105021.1-202ENST00000570572 669 ntBASIC19.48■□□□□ 0.71
COL2A1P02458 AC061975.2-201ENST00000581722 295 ntBASIC19.48■□□□□ 0.71
COL2A1P02458 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL2A1P02458 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL2A1P02458 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL2A1P02458 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL2A1P02458 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL2A1P02458 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL2A1P02458 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.47■□□□□ 0.71
COL2A1P02458 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.47■□□□□ 0.71
COL2A1P02458 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL2A1P02458 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.47■□□□□ 0.71
COL2A1P02458 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.47■□□□□ 0.71
COL2A1P02458 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.47■□□□□ 0.71
COL2A1P02458 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.47■□□□□ 0.71
COL2A1P02458 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.47■□□□□ 0.71
COL2A1P02458 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.47■□□□□ 0.71
COL2A1P02458 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.47■□□□□ 0.71
COL2A1P02458 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL2A1P02458 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL2A1P02458 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL2A1P02458 GPAA1P2-202ENST00000606848 1787 ntBASIC19.47■□□□□ 0.71
COL2A1P02458 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 RPL37AP1-201ENST00000412502 279 ntBASIC19.46■□□□□ 0.71
COL2A1P02458 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL2A1P02458 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.46■□□□□ 0.71
COL2A1P02458 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.46■□□□□ 0.71
COL2A1P02458 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
COL2A1P02458 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL2A1P02458 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.45■□□□□ 0.7
COL2A1P02458 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
COL2A1P02458 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL2A1P02458 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL2A1P02458 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.45■□□□□ 0.7
COL2A1P02458 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL2A1P02458 AL031731.1-201ENST00000642131 2094 ntBASIC19.45■□□□□ 0.7
COL2A1P02458 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL2A1P02458 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL2A1P02458 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL2A1P02458 AL645728.1-201ENST00000366221 2101 ntBASIC19.45■□□□□ 0.7
COL2A1P02458 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL2A1P02458 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL2A1P02458 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.45■□□□□ 0.7
COL2A1P02458 AL079307.3-201ENST00000556114 283 ntBASIC19.45■□□□□ 0.7
COL2A1P02458 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL2A1P02458 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms