Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.05■□□□□ 0.64
ALDH1A1P00352 AL109936.8-201ENST00000641772 604 ntBASIC19.05■□□□□ 0.64
ALDH1A1P00352 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALDH1A1P00352 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.05■□□□□ 0.64
ALDH1A1P00352 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.05■□□□□ 0.64
ALDH1A1P00352 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.05■□□□□ 0.64
ALDH1A1P00352 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ALDH1A1P00352 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ALDH1A1P00352 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ALDH1A1P00352 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.05■□□□□ 0.64
ALDH1A1P00352 AC138028.4-201ENST00000564984 1845 ntBASIC19.04■□□□□ 0.64
ALDH1A1P00352 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC023310.3-201ENST00000557027 670 ntBASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC100756.1-201ENST00000562736 682 ntBASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC138749.3-201ENST00000567691 622 ntBASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC008735.3-201ENST00000596646 500 ntBASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC116165.1-201ENST00000611806 668 ntBASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC004461.2-201ENST00000629517 803 ntBASIC19.04■□□□□ 0.64
ALDH1A1P00352 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ALDH1A1P00352 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ALDH1A1P00352 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 AL033527.5-201ENST00000641382 801 ntBASIC19.03■□□□□ 0.64
ALDH1A1P00352 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 KRT8P12-202ENST00000472924 1397 ntBASIC19.03■□□□□ 0.64
ALDH1A1P00352 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
ALDH1A1P00352 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ALDH1A1P00352 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
ALDH1A1P00352 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A1P00352 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ALDH1A1P00352 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ALDH1A1P00352 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ALDH1A1P00352 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.02■□□□□ 0.64
ALDH1A1P00352 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms