Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
MBD3O95983 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD3O95983 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
MBD3O95983 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD3O95983 AC132938.5-201ENST00000624980 1813 ntBASIC19.41■□□□□ 0.7
MBD3O95983 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD3O95983 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD3O95983 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MBD3O95983 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MBD3O95983 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD3O95983 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MBD3O95983 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD3O95983 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.41■□□□□ 0.7
MBD3O95983 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 KLF4P1-201ENST00000412782 1185 ntBASIC19.41■□□□□ 0.7
MBD3O95983 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.41■□□□□ 0.7
MBD3O95983 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD3O95983 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD3O95983 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD3O95983 AL353801.3-201ENST00000609898 542 ntBASIC19.41■□□□□ 0.7
MBD3O95983 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.41■□□□□ 0.7
MBD3O95983 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 AC002310.6-201ENST00000624451 1377 ntBASIC19.41■□□□□ 0.7
MBD3O95983 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD3O95983 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MBD3O95983 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3O95983 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD3O95983 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
MBD3O95983 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.4■□□□□ 0.7
MBD3O95983 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
MBD3O95983 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
MBD3O95983 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.4■□□□□ 0.7
MBD3O95983 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3O95983 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3O95983 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MBD3O95983 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
MBD3O95983 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MBD3O95983 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
MBD3O95983 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3O95983 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3O95983 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3O95983 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3O95983 HBZP1-201ENST00000354915 429 ntBASIC19.39■□□□□ 0.69
MBD3O95983 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3O95983 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms