Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA3O95167 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
NDUFA3O95167 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 AC009078.2-202ENST00000463353 338 ntBASIC13.52□□□□□ -0.25
NDUFA3O95167 AC092910.1-201ENST00000482027 1129 ntBASIC13.52□□□□□ -0.25
NDUFA3O95167 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFA3O95167 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFA3O95167 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFA3O95167 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NDUFA3O95167 AC013467.2-201ENST00000605472 835 ntBASIC13.52□□□□□ -0.25
NDUFA3O95167 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFA3O95167 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFA3O95167 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA3O95167 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NDUFA3O95167 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
NDUFA3O95167 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NDUFA3O95167 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NDUFA3O95167 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 PCDHA12-202ENST00000613593 2588 ntBASIC13.52□□□□□ -0.25
NDUFA3O95167 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA3O95167 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.51□□□□□ -0.25
NDUFA3O95167 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 HLA-A-201ENST00000376802 1334 ntBASIC13.51□□□□□ -0.25
NDUFA3O95167 AC129492.6-201ENST00000611383 1305 ntBASIC13.51□□□□□ -0.25
NDUFA3O95167 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
NDUFA3O95167 MRPL20P1-201ENST00000400819 433 ntBASIC13.51□□□□□ -0.25
NDUFA3O95167 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NDUFA3O95167 AC098831.1-202ENST00000438821 336 ntBASIC13.51□□□□□ -0.25
NDUFA3O95167 AC108073.2-201ENST00000464002 357 ntBASIC13.51□□□□□ -0.25
NDUFA3O95167 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.51□□□□□ -0.25
NDUFA3O95167 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.51□□□□□ -0.25
NDUFA3O95167 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
NDUFA3O95167 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 AC116407.3-201ENST00000623905 1129 ntBASIC13.51□□□□□ -0.25
NDUFA3O95167 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA3O95167 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFA3O95167 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 AC078925.2-201ENST00000624013 1973 ntBASIC13.51□□□□□ -0.25
NDUFA3O95167 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA3O95167 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA3O95167 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.5□□□□□ -0.25
NDUFA3O95167 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA3O95167 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA3O95167 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
NDUFA3O95167 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
NDUFA3O95167 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
NDUFA3O95167 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.5□□□□□ -0.25
NDUFA3O95167 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NDUFA3O95167 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms