Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.21■□□□□ 0.03
CEACAM4O75871 RN7SL828P-201ENST00000607615 303 ntBASIC15.21■□□□□ 0.03
CEACAM4O75871 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CEACAM4O75871 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CEACAM4O75871 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CEACAM4O75871 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CEACAM4O75871 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CEACAM4O75871 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CEACAM4O75871 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.21■□□□□ 0.02
CEACAM4O75871 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.21■□□□□ 0.02
CEACAM4O75871 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
CEACAM4O75871 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.21■□□□□ 0.02
CEACAM4O75871 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.2■□□□□ 0.02
CEACAM4O75871 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.2■□□□□ 0.02
CEACAM4O75871 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 CU639417.3-201ENST00000624240 1404 ntBASIC15.2■□□□□ 0.02
CEACAM4O75871 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CEACAM4O75871 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.2■□□□□ 0.02
CEACAM4O75871 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CEACAM4O75871 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CEACAM4O75871 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.2■□□□□ 0.02
CEACAM4O75871 OR8S1-201ENST00000310194 1080 ntBASIC15.2■□□□□ 0.02
CEACAM4O75871 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CEACAM4O75871 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 RPL37AP1-201ENST00000412502 279 ntBASIC15.2■□□□□ 0.02
CEACAM4O75871 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.2■□□□□ 0.02
CEACAM4O75871 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.2■□□□□ 0.02
CEACAM4O75871 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.2■□□□□ 0.02
CEACAM4O75871 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.2■□□□□ 0.02
CEACAM4O75871 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.2■□□□□ 0.02
CEACAM4O75871 ZNF890P-202ENST00000530367 1156 ntBASIC15.2■□□□□ 0.02
CEACAM4O75871 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.2■□□□□ 0.02
CEACAM4O75871 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 BANF1P1-201ENST00000553684 263 ntBASIC15.2■□□□□ 0.02
CEACAM4O75871 TP53TG3HP-202ENST00000569755 579 ntBASIC15.2■□□□□ 0.02
CEACAM4O75871 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.2■□□□□ 0.02
CEACAM4O75871 AC008738.7-201ENST00000609744 511 ntBASIC15.2■□□□□ 0.02
CEACAM4O75871 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.2■□□□□ 0.02
CEACAM4O75871 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
CEACAM4O75871 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.2■□□□□ 0.02
CEACAM4O75871 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CEACAM4O75871 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.2■□□□□ 0.02
CEACAM4O75871 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CEACAM4O75871 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.19■□□□□ 0.02
CEACAM4O75871 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.19■□□□□ 0.02
CEACAM4O75871 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.19■□□□□ 0.02
CEACAM4O75871 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.19■□□□□ 0.02
CEACAM4O75871 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.19■□□□□ 0.02
CEACAM4O75871 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.19■□□□□ 0.02
CEACAM4O75871 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.19■□□□□ 0.02
CEACAM4O75871 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.19■□□□□ 0.02
CEACAM4O75871 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.19■□□□□ 0.02
CEACAM4O75871 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
CEACAM4O75871 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.19■□□□□ 0.02
CEACAM4O75871 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.19■□□□□ 0.02
CEACAM4O75871 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.19■□□□□ 0.02
CEACAM4O75871 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.19■□□□□ 0.02
CEACAM4O75871 AL589739.1-201ENST00000607720 493 ntBASIC15.19■□□□□ 0.02
CEACAM4O75871 AL133215.2-201ENST00000609242 977 ntBASIC15.19■□□□□ 0.02
CEACAM4O75871 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.19■□□□□ 0.02
CEACAM4O75871 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 LINC02012-201ENST00000608206 1725 ntBASIC15.19■□□□□ 0.02
CEACAM4O75871 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CEACAM4O75871 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.19■□□□□ 0.02
CEACAM4O75871 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CEACAM4O75871 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CEACAM4O75871 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.19■□□□□ 0.02
CEACAM4O75871 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms