Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRP4O75096 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.12■□□□□ 0.17
LRP4O75096 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.12■□□□□ 0.17
LRP4O75096 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRP4O75096 AL512652.2-201ENST00000625156 1716 ntBASIC16.12■□□□□ 0.17
LRP4O75096 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRP4O75096 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRP4O75096 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LRP4O75096 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.11■□□□□ 0.17
LRP4O75096 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LRP4O75096 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.11■□□□□ 0.17
LRP4O75096 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.11■□□□□ 0.17
LRP4O75096 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.11■□□□□ 0.17
LRP4O75096 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.11■□□□□ 0.17
LRP4O75096 RN7SL204P-201ENST00000582831 262 ntBASIC16.11■□□□□ 0.17
LRP4O75096 AC138761.1-201ENST00000584393 385 ntBASIC16.11■□□□□ 0.17
LRP4O75096 AC092364.2-202ENST00000597012 1073 ntBASIC16.11■□□□□ 0.17
LRP4O75096 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRP4O75096 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRP4O75096 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRP4O75096 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRP4O75096 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.11■□□□□ 0.17
LRP4O75096 TSPY16P-201ENST00000449843 468 ntBASIC16.11■□□□□ 0.17
LRP4O75096 AC018529.1-201ENST00000613063 361 ntBASIC16.11■□□□□ 0.17
LRP4O75096 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRP4O75096 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRP4O75096 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.1■□□□□ 0.17
LRP4O75096 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRP4O75096 GGT3P-204ENST00000453783 1664 ntBASIC16.1■□□□□ 0.17
LRP4O75096 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.1■□□□□ 0.17
LRP4O75096 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRP4O75096 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.1■□□□□ 0.17
LRP4O75096 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.1■□□□□ 0.17
LRP4O75096 IGHV3-42-201ENST00000520410 361 ntBASIC16.1■□□□□ 0.17
LRP4O75096 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.1■□□□□ 0.17
LRP4O75096 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 AC022144.1-201ENST00000602255 1580 ntBASIC16.1■□□□□ 0.17
LRP4O75096 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LRP4O75096 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.1■□□□□ 0.17
LRP4O75096 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
LRP4O75096 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRP4O75096 PCGF3-213ENST00000620529 1899 ntBASIC16.1■□□□□ 0.17
LRP4O75096 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.1■□□□□ 0.17
LRP4O75096 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRP4O75096 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.09■□□□□ 0.17
LRP4O75096 AL353705.2-201ENST00000428243 662 ntBASIC16.09■□□□□ 0.17
LRP4O75096 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.09■□□□□ 0.17
LRP4O75096 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRP4O75096 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRP4O75096 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.09■□□□□ 0.17
LRP4O75096 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.09■□□□□ 0.17
LRP4O75096 AL844908.2-201ENST00000609461 460 ntBASIC16.09■□□□□ 0.17
LRP4O75096 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms