Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PFDN1O60925 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PFDN1O60925 CICP17-201ENST00000418553 2377 ntBASIC15.1■□□□□ 0.01
PFDN1O60925 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.1■□□□□ 0.01
PFDN1O60925 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.09■□□□□ 0.01
PFDN1O60925 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PFDN1O60925 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.09■□□□□ 0.01
PFDN1O60925 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 MCRIP2P1-201ENST00000394346 511 ntBASIC15.09■□□□□ 0.01
PFDN1O60925 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.09■□□□□ 0.01
PFDN1O60925 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PFDN1O60925 AL354811.1-201ENST00000610286 706 ntBASIC15.09■□□□□ 0.01
PFDN1O60925 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PFDN1O60925 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.09■□□□□ 0.01
PFDN1O60925 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PFDN1O60925 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PFDN1O60925 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.08■□□□□ 0.01
PFDN1O60925 DGCR9-201ENST00000609630 2415 ntBASIC15.08■□□□□ 0.01
PFDN1O60925 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
PFDN1O60925 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PFDN1O60925 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
PFDN1O60925 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.08■□□□□ 0.01
PFDN1O60925 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.08■□□□□ 0.01
PFDN1O60925 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.08■□□□□ 0.01
PFDN1O60925 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.08■□□□□ 0.01
PFDN1O60925 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PFDN1O60925 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PFDN1O60925 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.08■□□□□ 0
PFDN1O60925 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.08■□□□□ 0
PFDN1O60925 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 AC027682.1-201ENST00000562846 899 ntBASIC15.08■□□□□ 0
PFDN1O60925 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.08■□□□□ 0
PFDN1O60925 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.08■□□□□ 0
PFDN1O60925 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PFDN1O60925 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.08■□□□□ 0
PFDN1O60925 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PFDN1O60925 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.08■□□□□ 0
PFDN1O60925 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.08■□□□□ 0
PFDN1O60925 AC005562.1-201ENST00000583030 3219 ntBASIC15.07■□□□□ 0
PFDN1O60925 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.07■□□□□ 0
PFDN1O60925 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.07■□□□□ 0
PFDN1O60925 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PFDN1O60925 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.07■□□□□ 0
PFDN1O60925 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PFDN1O60925 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PFDN1O60925 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms