Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 IGHGP-201ENST00000390555 1178 ntBASIC13.84□□□□□ -0.19
SSSCA1O60232 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.84□□□□□ -0.19
SSSCA1O60232 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 NAPSB-206ENST00000562112 1266 ntBASIC13.84□□□□□ -0.19
SSSCA1O60232 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.84□□□□□ -0.19
SSSCA1O60232 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 AC097374.2-201ENST00000618617 1306 ntBASIC13.84□□□□□ -0.19
SSSCA1O60232 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 AC005052.1-201ENST00000625181 2492 ntBASIC13.84□□□□□ -0.19
SSSCA1O60232 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSSCA1O60232 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSSCA1O60232 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSSCA1O60232 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.83□□□□□ -0.19
SSSCA1O60232 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
SSSCA1O60232 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSSCA1O60232 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSSCA1O60232 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSSCA1O60232 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSSCA1O60232 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SSSCA1O60232 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.83□□□□□ -0.2
SSSCA1O60232 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSSCA1O60232 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSSCA1O60232 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 CYP2D8P-201ENST00000433633 1490 ntBASIC13.83□□□□□ -0.2
SSSCA1O60232 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.83□□□□□ -0.2
SSSCA1O60232 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 GCSHP5-201ENST00000443090 522 ntBASIC13.83□□□□□ -0.2
SSSCA1O60232 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.83□□□□□ -0.2
SSSCA1O60232 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.83□□□□□ -0.2
SSSCA1O60232 AC111152.3-201ENST00000569699 673 ntBASIC13.83□□□□□ -0.2
SSSCA1O60232 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SSSCA1O60232 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.83□□□□□ -0.2
SSSCA1O60232 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.83□□□□□ -0.2
SSSCA1O60232 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.83□□□□□ -0.2
SSSCA1O60232 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 AC006538.1-201ENST00000567905 1585 ntBASIC13.83□□□□□ -0.2
SSSCA1O60232 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SSSCA1O60232 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.83□□□□□ -0.2
SSSCA1O60232 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.83□□□□□ -0.2
SSSCA1O60232 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSSCA1O60232 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SSSCA1O60232 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.82□□□□□ -0.2
SSSCA1O60232 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SSSCA1O60232 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SSSCA1O60232 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.82□□□□□ -0.2
SSSCA1O60232 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSSCA1O60232 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms