Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.95■□□□□ 0.62
ACTN4O43707 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ACTN4O43707 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.95■□□□□ 0.62
ACTN4O43707 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
ACTN4O43707 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.95■□□□□ 0.62
ACTN4O43707 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.95■□□□□ 0.62
ACTN4O43707 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ACTN4O43707 MIR4492-201ENST00000581627 80 ntBASIC18.95■□□□□ 0.62
ACTN4O43707 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.95■□□□□ 0.62
ACTN4O43707 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.95■□□□□ 0.62
ACTN4O43707 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.95■□□□□ 0.62
ACTN4O43707 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ACTN4O43707 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.95■□□□□ 0.62
ACTN4O43707 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
ACTN4O43707 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ACTN4O43707 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 AC005052.1-201ENST00000625181 2492 ntBASIC18.94■□□□□ 0.62
ACTN4O43707 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.94■□□□□ 0.62
ACTN4O43707 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.94■□□□□ 0.62
ACTN4O43707 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.94■□□□□ 0.62
ACTN4O43707 SLC25A6P2-201ENST00000497974 877 ntBASIC18.94■□□□□ 0.62
ACTN4O43707 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.94■□□□□ 0.62
ACTN4O43707 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.94■□□□□ 0.62
ACTN4O43707 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.94■□□□□ 0.62
ACTN4O43707 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 AL391005.1-201ENST00000623953 2435 ntBASIC18.94■□□□□ 0.62
ACTN4O43707 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ACTN4O43707 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ACTN4O43707 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.94■□□□□ 0.62
ACTN4O43707 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.93■□□□□ 0.62
ACTN4O43707 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ACTN4O43707 ME2P1-201ENST00000426028 1970 ntBASIC18.93■□□□□ 0.62
ACTN4O43707 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.93■□□□□ 0.62
ACTN4O43707 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.93■□□□□ 0.62
ACTN4O43707 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.93■□□□□ 0.62
ACTN4O43707 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ACTN4O43707 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.93■□□□□ 0.62
ACTN4O43707 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.93■□□□□ 0.62
ACTN4O43707 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ACTN4O43707 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.93■□□□□ 0.62
ACTN4O43707 SCARNA2-201ENST00000458748 420 ntBASIC18.93■□□□□ 0.62
ACTN4O43707 MPDU1-223ENST00000582151 728 ntBASIC18.93■□□□□ 0.62
ACTN4O43707 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms