Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HOXA2O43364 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXA2O43364 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXA2O43364 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXA2O43364 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXA2O43364 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HOXA2O43364 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXA2O43364 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXA2O43364 AC015922.1-201ENST00000421102 1152 ntBASIC17.96■□□□□ 0.47
HOXA2O43364 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXA2O43364 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXA2O43364 UGT1A2P-201ENST00000454886 866 ntBASIC17.96■□□□□ 0.47
HOXA2O43364 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXA2O43364 AC027369.6-201ENST00000525520 931 ntBASIC17.96■□□□□ 0.47
HOXA2O43364 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXA2O43364 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXA2O43364 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.96■□□□□ 0.47
HOXA2O43364 AC003101.2-201ENST00000612557 442 ntBASIC17.96■□□□□ 0.47
HOXA2O43364 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.96■□□□□ 0.47
HOXA2O43364 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXA2O43364 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXA2O43364 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.96■□□□□ 0.46
HOXA2O43364 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
HOXA2O43364 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXA2O43364 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 AC134043.2-201ENST00000624206 2238 ntBASIC17.95■□□□□ 0.46
HOXA2O43364 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HOXA2O43364 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
HOXA2O43364 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXA2O43364 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.95■□□□□ 0.46
HOXA2O43364 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXA2O43364 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXA2O43364 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
HOXA2O43364 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.95■□□□□ 0.46
HOXA2O43364 AC013467.2-201ENST00000605472 835 ntBASIC17.95■□□□□ 0.46
HOXA2O43364 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXA2O43364 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXA2O43364 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
HOXA2O43364 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXA2O43364 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXA2O43364 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXA2O43364 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXA2O43364 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXA2O43364 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXA2O43364 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HOXA2O43364 AL035456.1-201ENST00000456064 1369 ntBASIC17.94■□□□□ 0.46
HOXA2O43364 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXA2O43364 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA2O43364 AL353705.2-201ENST00000428243 662 ntBASIC17.94■□□□□ 0.46
HOXA2O43364 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.94■□□□□ 0.46
HOXA2O43364 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXA2O43364 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.94■□□□□ 0.46
HOXA2O43364 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXA2O43364 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.94■□□□□ 0.46
HOXA2O43364 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXA2O43364 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.94■□□□□ 0.46
HOXA2O43364 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXA2O43364 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms