Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
RIPK2O43353 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 TERF1P1-201ENST00000311003 1181 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 AP002414.1-201ENST00000391405 1147 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 RNF152P1-201ENST00000397754 604 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 AC113347.1-201ENST00000413321 391 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 TSPY22P-201ENST00000427496 604 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.19■□□□□ 0.34
RIPK2O43353 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.19■□□□□ 0.34
RIPK2O43353 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 AC013467.2-201ENST00000605472 835 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 AC083849.1-201ENST00000615227 514 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 TMEM191A-211ENST00000637163 1067 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.19■□□□□ 0.34
RIPK2O43353 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RIPK2O43353 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RIPK2O43353 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 AC073508.3-201ENST00000619697 1419 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RIPK2O43353 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.19■□□□□ 0.34
RIPK2O43353 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
RIPK2O43353 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RIPK2O43353 AC126177.1-201ENST00000547829 2218 ntBASIC17.19■□□□□ 0.34
RIPK2O43353 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.18■□□□□ 0.34
RIPK2O43353 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 AC006277.1-201ENST00000624348 1610 ntBASIC17.18■□□□□ 0.34
RIPK2O43353 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.18■□□□□ 0.34
RIPK2O43353 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 GGT3P-204ENST00000453783 1664 ntBASIC17.18■□□□□ 0.34
RIPK2O43353 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.18■□□□□ 0.34
RIPK2O43353 AL137013.1-201ENST00000432946 1228 ntBASIC17.18■□□□□ 0.34
RIPK2O43353 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.18■□□□□ 0.34
RIPK2O43353 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.18■□□□□ 0.34
RIPK2O43353 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 AC011467.2-201ENST00000598425 242 ntBASIC17.18■□□□□ 0.34
RIPK2O43353 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.18■□□□□ 0.34
RIPK2O43353 KRT8P49-201ENST00000604166 1432 ntBASIC17.18■□□□□ 0.34
RIPK2O43353 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RIPK2O43353 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RIPK2O43353 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RIPK2O43353 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RIPK2O43353 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RIPK2O43353 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.18■□□□□ 0.34
RIPK2O43353 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.17■□□□□ 0.34
RIPK2O43353 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.17■□□□□ 0.34
RIPK2O43353 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RIPK2O43353 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RIPK2O43353 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.17■□□□□ 0.34
RIPK2O43353 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms