Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 FGFR3P6-201ENST00000457012 610 ntBASIC12.13□□□□□ -0.47
PAX4O43316 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.13□□□□□ -0.47
PAX4O43316 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 UNC93B7-201ENST00000509439 705 ntBASIC12.13□□□□□ -0.47
PAX4O43316 AC073648.2-201ENST00000510116 352 ntBASIC12.13□□□□□ -0.47
PAX4O43316 AF238378.1-201ENST00000526806 358 ntBASIC12.13□□□□□ -0.47
PAX4O43316 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.13□□□□□ -0.47
PAX4O43316 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 MTDHP4-201ENST00000600287 670 ntBASIC12.13□□□□□ -0.47
PAX4O43316 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.13□□□□□ -0.47
PAX4O43316 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
PAX4O43316 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 AC080080.1-201ENST00000625121 2420 ntBASIC12.13□□□□□ -0.47
PAX4O43316 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
PAX4O43316 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.13□□□□□ -0.47
PAX4O43316 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 AC108860.2-201ENST00000562760 2183 ntBASIC12.13□□□□□ -0.47
PAX4O43316 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.13□□□□□ -0.47
PAX4O43316 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
PAX4O43316 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.13□□□□□ -0.47
PAX4O43316 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
PAX4O43316 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
PAX4O43316 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.13□□□□□ -0.47
PAX4O43316 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 AKR1C7P-201ENST00000305623 895 ntBASIC12.12□□□□□ -0.47
PAX4O43316 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.12□□□□□ -0.47
PAX4O43316 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 LINC00982-205ENST00000420957 435 ntBASIC12.12□□□□□ -0.47
PAX4O43316 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 FAAHP1-202ENST00000446499 1238 ntBASIC12.12□□□□□ -0.47
PAX4O43316 EMBP1-201ENST00000458200 901 ntBASIC12.12□□□□□ -0.47
PAX4O43316 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 SART3-203ENST00000546611 1184 ntBASIC12.12□□□□□ -0.47
PAX4O43316 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.12□□□□□ -0.47
PAX4O43316 AC139887.3-201ENST00000568585 713 ntBASIC12.12□□□□□ -0.47
PAX4O43316 RN7SL510P-201ENST00000581311 263 ntBASIC12.12□□□□□ -0.47
PAX4O43316 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.12□□□□□ -0.47
PAX4O43316 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PAX4O43316 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PAX4O43316 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms