Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.86■□□□□ 0.29
PHGDHO43175 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.86■□□□□ 0.29
PHGDHO43175 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
PHGDHO43175 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PHGDHO43175 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 ARMC10P1-201ENST00000313754 855 ntBASIC16.85■□□□□ 0.29
PHGDHO43175 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PHGDHO43175 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.85■□□□□ 0.29
PHGDHO43175 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.85■□□□□ 0.29
PHGDHO43175 AC010331.1-201ENST00000611423 582 ntBASIC16.85■□□□□ 0.29
PHGDHO43175 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 AC243591.1-201ENST00000452967 1364 ntBASIC16.85■□□□□ 0.29
PHGDHO43175 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PHGDHO43175 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHGDHO43175 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PHGDHO43175 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PHGDHO43175 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PHGDHO43175 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHGDHO43175 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.84■□□□□ 0.29
PHGDHO43175 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PHGDHO43175 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.84■□□□□ 0.29
PHGDHO43175 FOSL1P1-201ENST00000511041 816 ntBASIC16.84■□□□□ 0.29
PHGDHO43175 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PHGDHO43175 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.84■□□□□ 0.29
PHGDHO43175 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.84■□□□□ 0.29
PHGDHO43175 AC064862.7-201ENST00000604520 867 ntBASIC16.84■□□□□ 0.29
PHGDHO43175 AL732292.2-201ENST00000609649 430 ntBASIC16.84■□□□□ 0.29
PHGDHO43175 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.84■□□□□ 0.29
PHGDHO43175 AL590787.1-201ENST00000568856 1315 ntBASIC16.84■□□□□ 0.29
PHGDHO43175 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PHGDHO43175 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
PHGDHO43175 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.84■□□□□ 0.29
PHGDHO43175 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PHGDHO43175 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHGDHO43175 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.84■□□□□ 0.29
PHGDHO43175 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PHGDHO43175 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PHGDHO43175 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHGDHO43175 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHGDHO43175 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHGDHO43175 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms