Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CYP46A4P-201ENST00000414953 267 ntBASIC17.97■□□□□ 0.47
TNRC18O15417 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TNRC18O15417 AL049840.4-201ENST00000602422 811 ntBASIC17.97■□□□□ 0.47
TNRC18O15417 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TNRC18O15417 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TNRC18O15417 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.97■□□□□ 0.47
TNRC18O15417 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TNRC18O15417 AC091167.2-201ENST00000579581 588 ntBASIC17.97■□□□□ 0.47
TNRC18O15417 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.97■□□□□ 0.47
TNRC18O15417 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TNRC18O15417 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.97■□□□□ 0.47
TNRC18O15417 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.97■□□□□ 0.47
TNRC18O15417 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.97■□□□□ 0.47
TNRC18O15417 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.97■□□□□ 0.47
TNRC18O15417 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.97■□□□□ 0.47
TNRC18O15417 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TNRC18O15417 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.97■□□□□ 0.47
TNRC18O15417 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.97■□□□□ 0.47
TNRC18O15417 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 YRDCP1-201ENST00000621419 643 ntBASIC17.97■□□□□ 0.47
TNRC18O15417 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNRC18O15417 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.96■□□□□ 0.47
TNRC18O15417 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.96■□□□□ 0.47
TNRC18O15417 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.96■□□□□ 0.47
TNRC18O15417 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.96■□□□□ 0.47
TNRC18O15417 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TNRC18O15417 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.96■□□□□ 0.47
TNRC18O15417 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.96■□□□□ 0.47
TNRC18O15417 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.96■□□□□ 0.47
TNRC18O15417 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNRC18O15417 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TNRC18O15417 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.96■□□□□ 0.47
TNRC18O15417 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNRC18O15417 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.96■□□□□ 0.47
TNRC18O15417 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.96■□□□□ 0.47
TNRC18O15417 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.96■□□□□ 0.47
TNRC18O15417 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.96■□□□□ 0.47
TNRC18O15417 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TNRC18O15417 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNRC18O15417 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TNRC18O15417 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TNRC18O15417 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.95■□□□□ 0.46
TNRC18O15417 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TNRC18O15417 AL512430.1-201ENST00000392575 860 ntBASIC17.95■□□□□ 0.46
TNRC18O15417 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.95■□□□□ 0.46
TNRC18O15417 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TNRC18O15417 TIMM17BP1-201ENST00000545713 516 ntBASIC17.95■□□□□ 0.46
TNRC18O15417 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.95■□□□□ 0.46
TNRC18O15417 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 AHCYP2-201ENST00000430630 1300 ntBASIC17.95■□□□□ 0.46
TNRC18O15417 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TNRC18O15417 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.95■□□□□ 0.46
TNRC18O15417 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.95■□□□□ 0.46
TNRC18O15417 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.95■□□□□ 0.46
TNRC18O15417 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.95■□□□□ 0.46
TNRC18O15417 AC106760.1-201ENST00000508690 800 ntBASIC17.95■□□□□ 0.46
TNRC18O15417 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.95■□□□□ 0.46
TNRC18O15417 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.95■□□□□ 0.46
TNRC18O15417 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.95■□□□□ 0.46
TNRC18O15417 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.95■□□□□ 0.46
TNRC18O15417 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.95■□□□□ 0.46
TNRC18O15417 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNRC18O15417 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms