Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
FOXN1O15353 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 AC009949.1-201ENST00000623048 1830 ntBASIC20.13■□□□□ 0.81
FOXN1O15353 AC020916.1-201ENST00000587762 1774 ntBASIC20.13■□□□□ 0.81
FOXN1O15353 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FOXN1O15353 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
FOXN1O15353 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.12■□□□□ 0.81
FOXN1O15353 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXN1O15353 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 AC098614.1-201ENST00000368528 745 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.12■□□□□ 0.81
FOXN1O15353 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
FOXN1O15353 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.12■□□□□ 0.81
FOXN1O15353 RAB43P1-201ENST00000561790 589 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 AL135744.1-201ENST00000565098 629 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.12■□□□□ 0.81
FOXN1O15353 MIR6080-201ENST00000617359 66 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 GPR182-203ENST00000622922 591 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 AC084121.4-201ENST00000641598 221 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 AF228730.8-201ENST00000642140 221 ntBASIC20.12■□□□□ 0.81
FOXN1O15353 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.12■□□□□ 0.81
FOXN1O15353 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FOXN1O15353 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.12■□□□□ 0.81
FOXN1O15353 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXN1O15353 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXN1O15353 SIRPAP1-201ENST00000448467 1770 ntBASIC20.11■□□□□ 0.81
FOXN1O15353 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXN1O15353 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
FOXN1O15353 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXN1O15353 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXN1O15353 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXN1O15353 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXN1O15353 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXN1O15353 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXN1O15353 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXN1O15353 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.11■□□□□ 0.81
FOXN1O15353 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXN1O15353 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC20.11■□□□□ 0.81
FOXN1O15353 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
FOXN1O15353 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.11■□□□□ 0.81
FOXN1O15353 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
FOXN1O15353 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
FOXN1O15353 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
FOXN1O15353 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.1■□□□□ 0.81
FOXN1O15353 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 REXO1L11P-201ENST00000620964 1927 ntBASIC20.1■□□□□ 0.81
FOXN1O15353 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
FOXN1O15353 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXN1O15353 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.1■□□□□ 0.81
FOXN1O15353 ELK2AP-201ENST00000392510 1007 ntBASIC20.1■□□□□ 0.81
FOXN1O15353 AC092506.1-202ENST00000401022 528 ntBASIC20.1■□□□□ 0.81
FOXN1O15353 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
FOXN1O15353 SPCS2P4-201ENST00000436160 681 ntBASIC20.1■□□□□ 0.81
FOXN1O15353 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXN1O15353 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.1■□□□□ 0.81
FOXN1O15353 AC132938.2-201ENST00000579188 680 ntBASIC20.1■□□□□ 0.81
FOXN1O15353 MIR4538-201ENST00000581377 78 ntBASIC20.1■□□□□ 0.81
FOXN1O15353 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.1■□□□□ 0.81
FOXN1O15353 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXN1O15353 MIR6787-201ENST00000616675 61 ntBASIC20.1■□□□□ 0.81
FOXN1O15353 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.1■□□□□ 0.81
FOXN1O15353 AL591163.1-201ENST00000641757 987 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms