Protein–RNA interactions for Protein: O15258

RER1, Protein RER1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RER1O15258 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RER1O15258 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
RER1O15258 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RER1O15258 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
RER1O15258 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RER1O15258 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.85□□□□□ -0.03
RER1O15258 RNPS1P1-201ENST00000507437 918 ntBASIC14.85□□□□□ -0.03
RER1O15258 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 OR7E14P-202ENST00000530490 1290 ntBASIC14.85□□□□□ -0.03
RER1O15258 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.85□□□□□ -0.03
RER1O15258 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.85□□□□□ -0.03
RER1O15258 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.85□□□□□ -0.03
RER1O15258 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.85□□□□□ -0.03
RER1O15258 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.85□□□□□ -0.03
RER1O15258 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
RER1O15258 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RER1O15258 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RER1O15258 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RER1O15258 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.85□□□□□ -0.03
RER1O15258 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RER1O15258 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.84□□□□□ -0.03
RER1O15258 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 FAM197Y8-203ENST00000450145 560 ntBASIC14.84□□□□□ -0.03
RER1O15258 AC087163.2-201ENST00000457299 853 ntBASIC14.84□□□□□ -0.03
RER1O15258 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.84□□□□□ -0.03
RER1O15258 AL121912.1-201ENST00000603683 238 ntBASIC14.84□□□□□ -0.03
RER1O15258 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 LINC00895-201ENST00000629028 1637 ntBASIC14.84□□□□□ -0.03
RER1O15258 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.84□□□□□ -0.03
RER1O15258 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RER1O15258 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.84□□□□□ -0.03
RER1O15258 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RER1O15258 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms