Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
CASQ2O14958 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CASQ2O14958 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CASQ2O14958 AP003097.1-201ENST00000530657 1135 ntBASIC16.1■□□□□ 0.17
CASQ2O14958 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.1■□□□□ 0.17
CASQ2O14958 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CASQ2O14958 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CASQ2O14958 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
CASQ2O14958 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.1■□□□□ 0.17
CASQ2O14958 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.1■□□□□ 0.17
CASQ2O14958 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.1■□□□□ 0.17
CASQ2O14958 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.1■□□□□ 0.17
CASQ2O14958 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CASQ2O14958 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CASQ2O14958 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.09■□□□□ 0.17
CASQ2O14958 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.09■□□□□ 0.17
CASQ2O14958 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
CASQ2O14958 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CASQ2O14958 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.09■□□□□ 0.17
CASQ2O14958 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CASQ2O14958 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CASQ2O14958 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.09■□□□□ 0.17
CASQ2O14958 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.09■□□□□ 0.17
CASQ2O14958 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.09■□□□□ 0.17
CASQ2O14958 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.09■□□□□ 0.17
CASQ2O14958 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.09■□□□□ 0.17
CASQ2O14958 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.09■□□□□ 0.17
CASQ2O14958 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.09■□□□□ 0.17
CASQ2O14958 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CASQ2O14958 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.09■□□□□ 0.17
CASQ2O14958 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CASQ2O14958 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CASQ2O14958 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CASQ2O14958 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.08■□□□□ 0.17
CASQ2O14958 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CASQ2O14958 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CASQ2O14958 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.08■□□□□ 0.17
CASQ2O14958 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CASQ2O14958 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CASQ2O14958 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
CASQ2O14958 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.08■□□□□ 0.17
CASQ2O14958 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CASQ2O14958 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CASQ2O14958 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CASQ2O14958 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.08■□□□□ 0.16
CASQ2O14958 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CASQ2O14958 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.08■□□□□ 0.16
CASQ2O14958 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.08■□□□□ 0.16
CASQ2O14958 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.08■□□□□ 0.16
CASQ2O14958 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.08■□□□□ 0.16
CASQ2O14958 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.08■□□□□ 0.16
CASQ2O14958 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.08■□□□□ 0.16
CASQ2O14958 SEC1P-202ENST00000473944 940 ntBASIC16.08■□□□□ 0.16
CASQ2O14958 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.08■□□□□ 0.16
CASQ2O14958 AP003041.3-201ENST00000527151 707 ntBASIC16.08■□□□□ 0.16
CASQ2O14958 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.08■□□□□ 0.16
CASQ2O14958 AC133041.1-202ENST00000642053 222 ntBASIC16.08■□□□□ 0.16
CASQ2O14958 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CASQ2O14958 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CASQ2O14958 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms