Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 AC103564.2-201ENST00000432853 1299 ntBASIC14.44□□□□□ -0.1
SDCBPO00560 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.44□□□□□ -0.1
SDCBPO00560 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.44□□□□□ -0.1
SDCBPO00560 AC122714.2-201ENST00000502787 707 ntBASIC14.44□□□□□ -0.1
SDCBPO00560 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.44□□□□□ -0.1
SDCBPO00560 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SDCBPO00560 Z69720.1-201ENST00000601483 472 ntBASIC14.44□□□□□ -0.1
SDCBPO00560 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 AL513523.2-202ENST00000427283 2040 ntBASIC14.44□□□□□ -0.1
SDCBPO00560 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SDCBPO00560 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SDCBPO00560 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SDCBPO00560 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SDCBPO00560 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SDCBPO00560 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SDCBPO00560 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.43□□□□□ -0.1
SDCBPO00560 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.43□□□□□ -0.1
SDCBPO00560 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 MINOS1P3-201ENST00000457048 203 ntBASIC14.43□□□□□ -0.1
SDCBPO00560 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.43□□□□□ -0.1
SDCBPO00560 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.43□□□□□ -0.1
SDCBPO00560 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SDCBPO00560 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
SDCBPO00560 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SDCBPO00560 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SDCBPO00560 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SDCBPO00560 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.42□□□□□ -0.1
SDCBPO00560 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SDCBPO00560 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.42□□□□□ -0.1
SDCBPO00560 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SDCBPO00560 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.42□□□□□ -0.1
SDCBPO00560 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.42□□□□□ -0.1
SDCBPO00560 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SDCBPO00560 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.42□□□□□ -0.1
SDCBPO00560 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.42□□□□□ -0.1
SDCBPO00560 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SDCBPO00560 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.42□□□□□ -0.1
SDCBPO00560 LINC00265-3P-201ENST00000447588 903 ntBASIC14.42□□□□□ -0.1
SDCBPO00560 AC091607.1-201ENST00000490318 1060 ntBASIC14.42□□□□□ -0.1
SDCBPO00560 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SDCBPO00560 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.42□□□□□ -0.1
SDCBPO00560 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SDCBPO00560 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms