Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.57■■□□□ 1.04
CHL1O00533 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.57■■□□□ 1.04
CHL1O00533 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CHL1O00533 HLA-J-203ENST00000494367 1087 ntBASIC21.57■■□□□ 1.04
CHL1O00533 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.57■■□□□ 1.04
CHL1O00533 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.57■■□□□ 1.04
CHL1O00533 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.57■■□□□ 1.04
CHL1O00533 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CHL1O00533 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CHL1O00533 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.57■■□□□ 1.04
CHL1O00533 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CHL1O00533 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.57■■□□□ 1.04
CHL1O00533 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHL1O00533 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.57■■□□□ 1.04
CHL1O00533 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.56■■□□□ 1.04
CHL1O00533 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.56■■□□□ 1.04
CHL1O00533 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CHL1O00533 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHL1O00533 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC21.56■■□□□ 1.04
CHL1O00533 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHL1O00533 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
CHL1O00533 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHL1O00533 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.56■■□□□ 1.04
CHL1O00533 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.56■■□□□ 1.04
CHL1O00533 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.56■■□□□ 1.04
CHL1O00533 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.56■■□□□ 1.04
CHL1O00533 GPS2P2-201ENST00000430745 888 ntBASIC21.56■■□□□ 1.04
CHL1O00533 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHL1O00533 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.56■■□□□ 1.04
CHL1O00533 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.56■■□□□ 1.04
CHL1O00533 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.56■■□□□ 1.04
CHL1O00533 AC006538.1-201ENST00000567905 1585 ntBASIC21.56■■□□□ 1.04
CHL1O00533 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHL1O00533 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHL1O00533 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.56■■□□□ 1.04
CHL1O00533 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHL1O00533 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.55■■□□□ 1.04
CHL1O00533 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.55■■□□□ 1.04
CHL1O00533 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 AC023141.5-201ENST00000458585 616 ntBASIC21.55■■□□□ 1.04
CHL1O00533 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.55■■□□□ 1.04
CHL1O00533 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.55■■□□□ 1.04
CHL1O00533 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 KRT8P23-201ENST00000560090 1207 ntBASIC21.55■■□□□ 1.04
CHL1O00533 AC009093.7-201ENST00000623853 1223 ntBASIC21.55■■□□□ 1.04
CHL1O00533 AC008267.7-201ENST00000624570 1194 ntBASIC21.55■■□□□ 1.04
CHL1O00533 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.55■■□□□ 1.04
CHL1O00533 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHL1O00533 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CHL1O00533 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CHL1O00533 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.55■■□□□ 1.04
CHL1O00533 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CHL1O00533 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
CHL1O00533 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHL1O00533 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CHL1O00533 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.54■■□□□ 1.04
CHL1O00533 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CHL1O00533 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.54■■□□□ 1.04
CHL1O00533 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.54■■□□□ 1.04
CHL1O00533 PMS2P2-201ENST00000425039 1128 ntBASIC21.54■■□□□ 1.04
CHL1O00533 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.54■■□□□ 1.04
CHL1O00533 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.54■■□□□ 1.04
CHL1O00533 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.54■■□□□ 1.04
CHL1O00533 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHL1O00533 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CHL1O00533 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
CHL1O00533 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHL1O00533 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHL1O00533 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms