Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
COLCA2A8K830 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.96□□□□□ -0.33
COLCA2A8K830 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COLCA2A8K830 BX276092.7-203ENST00000637198 1536 ntBASIC12.96□□□□□ -0.33
COLCA2A8K830 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COLCA2A8K830 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
COLCA2A8K830 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COLCA2A8K830 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
COLCA2A8K830 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COLCA2A8K830 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COLCA2A8K830 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
COLCA2A8K830 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
COLCA2A8K830 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COLCA2A8K830 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
COLCA2A8K830 AC068338.2-201ENST00000563278 1430 ntBASIC12.96□□□□□ -0.34
COLCA2A8K830 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
COLCA2A8K830 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.96□□□□□ -0.34
COLCA2A8K830 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COLCA2A8K830 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
COLCA2A8K830 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.96□□□□□ -0.34
COLCA2A8K830 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 RASA4CP-201ENST00000424092 1398 ntBASIC12.95□□□□□ -0.34
COLCA2A8K830 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 LINC02228-203ENST00000641970 1355 ntBASIC12.95□□□□□ -0.34
COLCA2A8K830 AL671710.1-201ENST00000610245 2349 ntBASIC12.95□□□□□ -0.34
COLCA2A8K830 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
COLCA2A8K830 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 AC135279.3-201ENST00000610945 1311 ntBASIC12.95□□□□□ -0.34
COLCA2A8K830 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
COLCA2A8K830 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
COLCA2A8K830 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 AC091951.1-201ENST00000512854 2465 ntBASIC12.95□□□□□ -0.34
COLCA2A8K830 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC12.95□□□□□ -0.34
COLCA2A8K830 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
COLCA2A8K830 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.95□□□□□ -0.34
COLCA2A8K830 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
COLCA2A8K830 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.95□□□□□ -0.34
COLCA2A8K830 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.95□□□□□ -0.34
COLCA2A8K830 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.95□□□□□ -0.34
COLCA2A8K830 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
COLCA2A8K830 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
COLCA2A8K830 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COLCA2A8K830 TCAF1P1-201ENST00000414990 2232 ntBASIC12.94□□□□□ -0.34
COLCA2A8K830 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COLCA2A8K830 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 EGFEM1P-202ENST00000431685 1563 ntBASIC12.94□□□□□ -0.34
COLCA2A8K830 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COLCA2A8K830 FRMD8P1-201ENST00000440433 1524 ntBASIC12.94□□□□□ -0.34
COLCA2A8K830 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
COLCA2A8K830 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 OR2I1P-210ENST00000642037 4691 ntBASIC12.94□□□□□ -0.34
COLCA2A8K830 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.94□□□□□ -0.34
COLCA2A8K830 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 AC008622.2-201ENST00000617006 1229 ntBASIC12.94□□□□□ -0.34
COLCA2A8K830 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 AC118758.2-201ENST00000614242 2813 ntBASIC12.94□□□□□ -0.34
COLCA2A8K830 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COLCA2A8K830 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.94□□□□□ -0.34
COLCA2A8K830 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms