Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 KRT8P49-201ENST00000604166 1432 ntBASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM9A6NGZ8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 HCG4-201ENST00000418983 998 ntBASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 CXCL1P1-201ENST00000502804 216 ntBASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 AC096734.2-201ENST00000562054 433 ntBASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 AC002310.6-201ENST00000624451 1377 ntBASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 AL353732.1-201ENST00000569618 1459 ntBASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 PKD1P5-201ENST00000532415 10291 ntBASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM9A6NGZ8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 MED15P5-201ENST00000423150 992 ntBASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 FAM185BP-201ENST00000443595 716 ntBASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 HCG4B-203ENST00000450128 991 ntBASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 KRT18P3-201ENST00000451602 1288 ntBASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 AL645728.2-201ENST00000641974 660 ntBASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM9A6NGZ8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms