Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 STK19B-204ENST00000512515 211 ntBASIC14.49□□□□□ -0.09
TMEM235A6NFC5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 AC010203.1-204ENST00000548782 407 ntBASIC14.49□□□□□ -0.09
TMEM235A6NFC5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 AC145285.6-201ENST00000604632 637 ntBASIC14.49□□□□□ -0.09
TMEM235A6NFC5 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.49□□□□□ -0.09
TMEM235A6NFC5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.49□□□□□ -0.09
TMEM235A6NFC5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 MTHFR-217ENST00000641820 1569 ntBASIC14.48□□□□□ -0.09
TMEM235A6NFC5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 ME2P1-201ENST00000426028 1970 ntBASIC14.48□□□□□ -0.09
TMEM235A6NFC5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 FAM220CP-201ENST00000395253 831 ntBASIC14.48□□□□□ -0.09
TMEM235A6NFC5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 AL353593.2-201ENST00000602529 1483 ntBASIC14.48□□□□□ -0.09
TMEM235A6NFC5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM235A6NFC5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 YBX1P2-201ENST00000489612 999 ntBASIC14.47□□□□□ -0.09
TMEM235A6NFC5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 AL138831.2-201ENST00000606564 490 ntBASIC14.47□□□□□ -0.09
TMEM235A6NFC5 AC139887.4-201ENST00000607877 719 ntBASIC14.47□□□□□ -0.09
TMEM235A6NFC5 AC073912.3-201ENST00000624414 853 ntBASIC14.47□□□□□ -0.09
TMEM235A6NFC5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM235A6NFC5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms