Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSC5DA1L4H1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SSC5DA1L4H1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SSC5DA1L4H1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSC5DA1L4H1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SSC5DA1L4H1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 AC087499.6-201ENST00000411576 835 ntBASIC19.39■□□□□ 0.69
SSC5DA1L4H1 AC098850.1-201ENST00000419919 790 ntBASIC19.39■□□□□ 0.69
SSC5DA1L4H1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 AC124947.2-201ENST00000547118 1133 ntBASIC19.39■□□□□ 0.69
SSC5DA1L4H1 SNX29P1-201ENST00000548357 1007 ntBASIC19.39■□□□□ 0.69
SSC5DA1L4H1 AL606495.2-201ENST00000605867 535 ntBASIC19.39■□□□□ 0.69
SSC5DA1L4H1 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.39■□□□□ 0.69
SSC5DA1L4H1 MIR6799-201ENST00000620297 69 ntBASIC19.39■□□□□ 0.69
SSC5DA1L4H1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSC5DA1L4H1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 TTTY23B-201ENST00000442790 549 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC022210.1-201ENST00000449856 793 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC023310.3-201ENST00000557027 670 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC100756.1-201ENST00000562736 682 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC138749.3-201ENST00000567691 622 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 MIR4259-201ENST00000584466 101 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 SRD5A3P1-201ENST00000603021 949 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC116165.1-201ENST00000611806 668 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AL033527.4-201ENST00000641026 673 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AC006277.1-201ENST00000624348 1610 ntBASIC19.38■□□□□ 0.69
SSC5DA1L4H1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSC5DA1L4H1 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 ELK1P1-201ENST00000485699 580 ntBASIC19.37■□□□□ 0.69
SSC5DA1L4H1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.37■□□□□ 0.69
SSC5DA1L4H1 AC061975.2-201ENST00000581722 295 ntBASIC19.37■□□□□ 0.69
SSC5DA1L4H1 CTBP2P3-201ENST00000585629 1255 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms