Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRBV9S1A1TA0A576 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 AL590787.1-201ENST00000568856 1315 ntBASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 TERC-201ENST00000602385 541 ntBASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 AC013467.2-201ENST00000605472 835 ntBASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 AL139011.1-202ENST00000642063 584 ntBASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TCRBV9S1A1TA0A576 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 IER3-202ENST00000376377 1350 ntBASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 AL049597.2-201ENST00000565575 961 ntBASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 AC010331.1-201ENST00000611423 582 ntBASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV9S1A1TA0A576 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV9S1A1TA0A576 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms