Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 IFNL4P1-201ENST00000607083 540 ntBASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 AC097637.2-201ENST00000624096 1997 ntBASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4X5D2U9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 BX005266.1-201ENST00000473402 457 ntBASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 NKAPP1-205ENST00000585790 367 ntBASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 NCF1C-201ENST00000438382 1427 ntBASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DRB4X5D2U9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AKR1C7P-201ENST00000305623 895 ntBASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DRB4X5D2U9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms