Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 AC136759.1-202ENST00000530858 2194 ntBASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
LINC01558Q9Y6Z2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 RBM17P2-201ENST00000616397 1405 ntBASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 AC020658.6-201ENST00000623564 1870 ntBASIC8.71□□□□□ -1.01
LINC01558Q9Y6Z2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 LINC01311-201ENST00000565162 1445 ntBASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
LINC01558Q9Y6Z2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 Z82170.1-201ENST00000625081 3192 ntBASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
LINC01558Q9Y6Z2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms