Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIR1233-1-201ENST00000408722 82 ntBASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 AC002310.6-201ENST00000624451 1377 ntBASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COL4A3BPQ9Y5P4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AGGF1P2-201ENST00000426656 2106 ntBASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 DNAJB3-201ENST00000446806 729 ntBASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AC087163.2-201ENST00000457299 853 ntBASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AC096734.2-201ENST00000562054 433 ntBASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AC010327.4-202ENST00000591484 748 ntBASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AC092865.6-201ENST00000642101 219 ntBASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL4A3BPQ9Y5P4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL4A3BPQ9Y5P4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.89■□□□□ 0.62
COL4A3BPQ9Y5P4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL4A3BPQ9Y5P4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.89■□□□□ 0.62
COL4A3BPQ9Y5P4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
COL4A3BPQ9Y5P4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
COL4A3BPQ9Y5P4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 UPF3AP3-201ENST00000420996 769 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 GPX1P2-201ENST00000429271 606 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 SLC25A6P2-201ENST00000497974 877 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 DUX4L17-201ENST00000557360 1267 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 TUBB8P12-201ENST00000308911 1335 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 TUBB7P-202ENST00000428444 1305 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 TUBB8P7-204ENST00000567960 1332 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 AL021920.2-201ENST00000624828 1351 ntBASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.89■□□□□ 0.61
COL4A3BPQ9Y5P4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL4A3BPQ9Y5P4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.88■□□□□ 0.61
COL4A3BPQ9Y5P4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL4A3BPQ9Y5P4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms