Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 IGLL3P-201ENST00000412472 434 ntBASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 AC007967.2-201ENST00000432613 625 ntBASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 OR6D1P-203ENST00000641209 4860 ntBASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAI2Q9Y5P3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 METTL21AP1-201ENST00000438852 635 ntBASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 FAM185BP-201ENST00000443595 716 ntBASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 CXCL1P1-201ENST00000502804 216 ntBASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 AC064836.3-201ENST00000607928 673 ntBASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 AL596442.2-201ENST00000610240 980 ntBASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAI2Q9Y5P3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RAI2Q9Y5P3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAI2Q9Y5P3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms