Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 RHOQP3-201ENST00000437982 621 ntBASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 AL023806.1-201ENST00000603994 1649 ntBASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGA3Q9Y5H0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 AC009949.1-201ENST00000623048 1830 ntBASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 LINC00982-205ENST00000420957 435 ntBASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 METTL21AP1-201ENST00000438852 635 ntBASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGA3Q9Y5H0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 CNN2P11-201ENST00000429351 262 ntBASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 ACTG1P14-201ENST00000446382 1122 ntBASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGA3Q9Y5H0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms