Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGB3Q9Y5G1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AC046158.3-201ENST00000624947 2558 ntBASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 SLC25A6P4-201ENST00000586535 553 ntBASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AP000867.4-201ENST00000641616 219 ntBASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 AL135999.2-201ENST00000622438 1686 ntBASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGB3Q9Y5G1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 ABCD1P5-201ENST00000445663 754 ntBASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AC009078.2-202ENST00000463353 338 ntBASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AF238378.1-201ENST00000526806 358 ntBASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGB3Q9Y5G1 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGB3Q9Y5G1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms