Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 PAUPAR-201ENST00000630360 2965 ntBASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2D4Q9Y2X8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AC113347.1-201ENST00000413321 391 ntBASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 TSPY5P-201ENST00000426936 936 ntBASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AL137013.1-201ENST00000432946 1228 ntBASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AC011840.4-201ENST00000578471 627 ntBASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 HYMAI.1-201ENST00000620949 238 ntBASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 AC124864.1-201ENST00000623408 392 ntBASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 LINC00895-201ENST00000629028 1637 ntBASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
UBE2D4Q9Y2X8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AL021920.2-201ENST00000624828 1351 ntBASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 RNF152P1-201ENST00000397754 604 ntBASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2D4Q9Y2X8 AC009533.2-201ENST00000543664 586 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms