Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AC018845.2-201ENST00000568326 409 ntBASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AL139011.1-202ENST00000642063 584 ntBASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AC012569.1-201ENST00000591191 1524 ntBASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHA4Q9UN74 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 RNA5SP416-201ENST00000516838 111 ntBASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 AP001350.2-201ENST00000625104 1094 ntBASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHA4Q9UN74 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 AL671883.3-201ENST00000603274 991 ntBASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 AC023141.13-201ENST00000604991 943 ntBASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 AC004877.2-201ENST00000623941 599 ntBASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 AL645728.2-201ENST00000641974 660 ntBASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHA4Q9UN74 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA4Q9UN74 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHA4Q9UN74 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA4Q9UN74 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA4Q9UN74 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA4Q9UN74 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHA4Q9UN74 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHA4Q9UN74 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms