Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN1Q9UMX0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBQLN1Q9UMX0 LINC00895-201ENST00000629028 1637 ntBASIC18.09■□□□□ 0.49
UBQLN1Q9UMX0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN1Q9UMX0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN1Q9UMX0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.08■□□□□ 0.49
UBQLN1Q9UMX0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
UBQLN1Q9UMX0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.08■□□□□ 0.49
UBQLN1Q9UMX0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBQLN1Q9UMX0 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.08■□□□□ 0.49
UBQLN1Q9UMX0 PCDHB17P-201ENST00000539533 2393 ntBASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 AC092474.2-201ENST00000424288 719 ntBASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 CNN2P11-201ENST00000429351 262 ntBASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 RARRES2P8-201ENST00000566335 367 ntBASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 AC105339.1-204ENST00000636249 355 ntBASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 LETM1P2-201ENST00000597330 2178 ntBASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBQLN1Q9UMX0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AC026120.1-201ENST00000611536 926 ntBASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AL513210.1-201ENST00000629608 234 ntBASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 AP001094.4-201ENST00000579008 2176 ntBASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN1Q9UMX0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 AKAP8P1-201ENST00000434743 1349 ntBASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN1Q9UMX0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms