Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NCKIPSDQ9NZQ3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKIPSDQ9NZQ3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKIPSDQ9NZQ3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCKIPSDQ9NZQ3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 MYCLP1-201ENST00000372451 1075 ntBASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AC093525.9-201ENST00000624961 1746 ntBASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AC105020.1-201ENST00000435356 2205 ntBASIC17.15■□□□□ 0.34
NCKIPSDQ9NZQ3 AC046185.3-201ENST00000623228 1824 ntBASIC17.14■□□□□ 0.34
NCKIPSDQ9NZQ3 AC018695.7-201ENST00000624587 2492 ntBASIC17.14■□□□□ 0.34
NCKIPSDQ9NZQ3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 GPX1P2-201ENST00000429271 606 ntBASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 MTDHP5-201ENST00000598980 586 ntBASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCKIPSDQ9NZQ3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 PCDHA14-201ENST00000506751 2298 ntBASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKIPSDQ9NZQ3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms